国家自然科学基金

National Natural Science Foundation of China (No. 61672035):

蛋白质-配体相互作用的深度学习自动编码和随机映射研究



Publication:

(* Correspondence Author)  

一、期刊论文
1. 第一作者论文
(1) Peng Chen; Qingxin Xiao; Jun Zhang; Chengjun Xie; Bing Wang; Occurrence prediction of cotton pests and diseases by bidirectional long short-term memory networks with climate and atmosphere circulation, Computers and Electronics in Agriculture, 2020, 176:0-105612. 第一标注

(2) Chen, Peng; Shen, Tong; Zhang, Youzhi; Wang, Bing; A Sequence-segment Neighbor Encoding Schema for Protein Hotspot Residue Prediction, Current Bioinformatics, 2020, 15(5):445-454. SCIE. 第一标注

 

2. 通讯作者论文(勿与第一作者论文重复)

(1) ShanShan, Hu; Peng, Chen*; PengYing, Gu; Bing, Wang; A Deep Learning-based Chemical System for QSAR Prediction, IEEE Journal of Biomedical and Health Informatics, 2020, 24(10):3020-3028. 第一标注

(2) Deng, Aijun; Zhang, Huan; Wang, Wenyan; Zhang, Jun; Fan, Dingdong; Chen, Peng*; Wang, Bing; Developing Computational Model to Predict Protein-Protein Interaction Sites Based on the XGBoost Algorithm, International Journal of Molecular Sciences, 2020, 21(7):21072274. SCIE, 其他. 第二标注

(3) Kai-chao, Miao; Ting-ting, Han; Ye-qing, Yao; Hui, Lu; Peng, Chen*; Bing, Wang; Jun, Zhang; Application of LSTM for short term fog forecasting based on meteorological elements, Neurocomputing, 2020, 408:285-291. 第二标注

(4) Bing, Wang; Lei, Wang; Chun-Hou, Zheng; Yan, Xiong; Chen, Peng*; Imbalance Data Processing Strategy for Protein Interaction Sites Prediction, IEEE/ACM Transactions on Computational Biology and Bioinformatics. SCIE. 第一标注

(5) Yan, Qian; Yang, Baohua; Wang, Wenyan; Wang, Bing; Chen, Peng*; Zhang, Jun; Apple Leaf Diseases Recognition Based on An Improved Convolutional Neural Network, Sensors, 2020, 20(12):0-3535. SCIE. 第一标注

(6) Tao, Fang; Peng, Chen*; Jun, Zhang; Bing, Wang; Crop leaf disease grade identification based on an improved convolutional neural network, Journal of Electronic Imaging, 2020, 29(01):0-1. 第一标注

(7) Wang, Yangyang; Xiao, Qingxin; Chen, Peng*; Wang, Bing*; In Silico Prediction of Drug-Induced Liver Injury Based on Ensemble Classifier Method, International Journal of Molecular Sciences, 2019, 20(17):20174106. SCIE. 第一标注

(8) Hu, ShanShan; Zhang, Chenglin; Chen, Peng*; Gu, Pengying*; Zhang, Jun; Wang, Bing; Predicting drug-target interactions from drug structure and protein sequence using novel convolutional neural networks, BMC Bioinformatics, 2019, 20(Suppl 25):0-689. 第一标注

(9) Xiao, Qingxin; Li, Weilu; Kai, Yuanzhong; Chen, Peng*; Zhang, Jun; Wang, Bing*; Occurrence prediction of pests and diseases in cotton on the basis of weather factors by long short term memory network, BMCBioinformatics, 2019, 20(1):0-688. SCIE. 第一标注

(10) Wang, Ye; Mei, Changqing; Zhou, Yuming; Wang, Yan; Zheng, Chunhou; Zhen, Xiao; Xiong, Yan; Chen, Peng*; Zhang, Jun; Wang, Bing*; Semi-supervised prediction of protein interaction sites from unlabeled sample information, BMC Bioinformatics, 2019, 20(Suppl 25):0-699. 第二标注

(11) Hang, Jie; Zhang, Dexiang; Chen, Peng*; Zhang, Jun; Wang, Bing*; Classification of Plant Leaf Diseases Based on Improved Convolutional Neural Network, Sensors, 2019, 19(19):0-4161. SCIE. 第一标注

(12) Li, Weilu; Chen, Peng*; Wang, Bing; Xie, Chengjun*; Automatic Localization and Count of Agricultural Crop Pests Based on an Improved Deep Learning Pipeline, Scientific Reports, 2019, 9(1):0-7024. SCIE. 第一标注

(13) Ge, Lin Wei; Zhang, Jun*; Xia, Yi; Chen, Peng*; Wang, Bing*; Zheng, Chun Hou; Deep spatial attention hashing network for image retrieval, Journal of Visual Communication and Image Representation, 2019, 63:0-UNSP 102577. SCIE. 第二标注

(14) Zhu, Muchun; Song, Xiaoping; Chen, Peng*; Wang, Wenyan; Wang, Bing*; dbHDPLS: A database of human disease-related protein-ligand structures, Computational Biology and Chemistry, 2019, 78:353-358. SCIE. 第一标注

(15) Liu Quanya; Chen Peng*; Wang Bing*; Zhang Jun; Li Jinyan; Hot spot prediction in protein-protein interactions by an ensemble system, BMC Systems Biology, 2018, 12:0-132. SCIE, ISTP. 第一标注

(16) Qiao, Yanhua; Xiong, Yi; Gao, Hongyun; Zhu, Xiaolei*; Chen, Peng*; Protein-protein interface hot spots prediction based on a hybrid feature selection strategy, BMC Bioinformatics, 2018, 19(1):0-14. SCIE, EI. 第四标注

(17) Liu Quanya; Chen Peng*; Wang Bing; Zhang Jun; Li Jinyan; dbMPIKT: a database of kinetic and thermodynamic mutant protein interactions, BMC Bioinformatics, 2018, 19(1):0-455. SCIE, EI. 第一标注

(18) Chengjun Xie; Rujing Wang; Jie Zhang; Peng Chen*; Wei Dong; Rui Li; Tianjiao Chen; Hongbo Chen; Multi-level learning features for automatic classification of field crop pests, Computers and Electronics in Agriculture, 2018, 152:233-241. 第三标注

(19) Xia Denan; Chen Peng*; Wang Bing; Zhang Jun*; Xie Chengjun; Insect Detection and Classification Based on an Improved Convolutional Neural Network, Sensors, 2018, 18(12):0-4169. SCIE, EI. 第一标注

(20) Wang Bing; Lu Kun; Zheng Xiao; Su Benyue; Zhou Yuming; Chen Peng*; Zhang Jun*; Early Stage Identification of Alzheimer's Disease Using a Two-stage Ensemble Classifier, Current Bioinformatics, 2018, 13(5):529-535. SCIE. 第三标注

(21) Zhang, Jun; Zhu, Muchun; Chen, Peng*; Wang, Bing*; DrugRPE: Random projection ensemble approach to drug-target interaction prediction, Neurocomputing, 2017, 228:256-262. 其他. 第一标注

(22) Zhang, Jun; Zheng, Chun-Hou; Xia, Yi; Wang, Bing; Chen, Peng*; Optimization enhanced genetic algorithm-support vector regression for the prediction of compound retention indices in gas chromatography, Neurocomputing, 2017, 240:183-190. 其他. 第一标注

(23) Hu Shan Shan; Chen Peng*; Wang Bing; Li Jinyan; Protein binding hot spots prediction from sequence only by a new ensemble learning method, Amino Acids, 2017, 49(10):1773-1785. SCIE. 第一标注

(24) Jiang Jinjian; Wang Nian; Chen Peng*; Zheng Chunhou; Wang Bing*; Prediction of Protein Hotspots from Whole Protein Sequences by a Random Projection Ensemble System, International Journal of Molecular Sciences, 2017, 18(7):0-1543. SCIE. 第一标注

(25) Jiang, Jinjian; Wang, Nian; Chen, Peng*; Zhang, Jun; Wang, Bing*; DrugECs: An Ensemble System with Feature Subspaces for Accurate Drug-Target Interaction Prediction, Biomed Research International, 2017, 2017:6340316. 其他. 第一标注

3. 既非第一作者又非通讯作者论文
 
二 、会议论文
1. 第一作者论文
2. 通讯作者论文(勿与第一作者论文重复)
(1) Xiao Qingxin; Li Weilu; Chen Peng*; Wang Bing; Prediction of Crop Pests and Diseases in Cotton by Long Short Term Memory Network, 14th International Conference on Intelligent Computing, ICIC 2018, China,Hubei,Wuhan, 2018-8-15至2018-8-18. EI. 第一标注

(2) Hu ShanShan; Xia DeNan; Chen Peng*; Wang Bing; Using Novel Convolutional Neural Networks Architecture to Predict Drug-Target Interactions, 14th International Conference on Intelligent Computing, ICIC 2018, China,Hubei,Wuhan, 2018-8-15至2018-8-18. EI. 第一标注
 

3. 既非第一作者又非通讯作者论文

 (1) Du Feng Lin; Li Jia Xing; Yang Zhi; Chen Peng; Wang Bing; Zhang Jun*; CAPTCHA Recognition Based on Faster R-CNN, 13th International Conference on Intelligent Computing (ICIC), United Kingdom, 2017-08-07至2017-08-10. EI. 第四标注

(2) Wang Wenyan; Lu Kun; Hong Rui; Chen Peng; Zhang Jun; Wang Bing*; A Machine Vision Method for Automatic Circular Parts Detection Based on Optimization Algorithm, 13th International Conference on Intelligent Computing (ICIC), United Kingdom, 2017-08-07至2017-08-10. EI. 第二标注

(3) Hu ShanShan; Chen Peng*; Zhang Jun; Wang Bing; Prediction of Hot Spots Based on Physicochemical Features and Relative Accessible Surface Area of Amino Acid Sequence, 12th International Conference on Intelligent Computing (ICIC), China,Gansu,Lanzhou, 2016-08-02至2016-08-05. EI. 第一标注

 

 

Tip:
  上述成果皆是由国家自然基金(61672035)资助。

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